Browse of TCMCG060C03953 protein

CDS

Accession Number	TCMCG060C03953
gbkey	CDS
Protein Id	XP_015582356.1
Location	join(13190..13370,13848..14068,15877..16017,16141..16311,17117..17216,18315..18433,18515..18637,18773..18844,19014..19106,19603..19716,19809..19931,20667..20852,20963..21037,22085..22221,23623..23757,24523..24668,24752..24817,26042..26148,26270..26350,26650..26724,26800..26901,27018..27186,27269..27417,28641..28724,28809..28909,29661..29814,29906..29980,30103..30244,31299..31950,33109..33160,33914..34059,34141..34321,34748..34846,35106..35485,35594..35770,36018..36114,36211..36366,36454..36684,36773..36856,36949..37056)
Gene	LOC8258407
GeneID	8258407
Organism	Ricinus communis

Protein

Length	1934aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA34677
db_source	XM_015726870.2
Definition	rRNA biogenesis protein RRP5 [Ricinus communis]

EGGNOG-MAPPER Annotation

COG_category	A
Description	Protein RRP5 homolog
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko03009        [VIEW IN KEGG]
KEGG_ko	ko:K14792        [VIEW IN KEGG]
EC	-
KEGG_Pathway	-
GOs	GO:0000460        [VIEW IN EMBL-EBI] GO:0000462        [VIEW IN EMBL-EBI] GO:0000466        [VIEW IN EMBL-EBI] GO:0003674        [VIEW IN EMBL-EBI] GO:0003676        [VIEW IN EMBL-EBI] GO:0003723        [VIEW IN EMBL-EBI] GO:0005488        [VIEW IN EMBL-EBI] GO:0005515        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005634        [VIEW IN EMBL-EBI] GO:0005654        [VIEW IN EMBL-EBI] GO:0005730        [VIEW IN EMBL-EBI] GO:0005886        [VIEW IN EMBL-EBI] GO:0006139        [VIEW IN EMBL-EBI] GO:0006364        [VIEW IN EMBL-EBI] GO:0006396        [VIEW IN EMBL-EBI] GO:0006725        [VIEW IN EMBL-EBI] GO:0006807        [VIEW IN EMBL-EBI] GO:0007275        [VIEW IN EMBL-EBI] GO:0008134        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0009553        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0010467        [VIEW IN EMBL-EBI] GO:0016020        [VIEW IN EMBL-EBI] GO:0016070        [VIEW IN EMBL-EBI] GO:0016072        [VIEW IN EMBL-EBI] GO:0022613        [VIEW IN EMBL-EBI] GO:0030490        [VIEW IN EMBL-EBI] GO:0030684        [VIEW IN EMBL-EBI] GO:0031974        [VIEW IN EMBL-EBI] GO:0031981        [VIEW IN EMBL-EBI] GO:0032040        [VIEW IN EMBL-EBI] GO:0032501        [VIEW IN EMBL-EBI] GO:0032502        [VIEW IN EMBL-EBI] GO:0032991        [VIEW IN EMBL-EBI] GO:0034470        [VIEW IN EMBL-EBI] GO:0034641        [VIEW IN EMBL-EBI] GO:0034660        [VIEW IN EMBL-EBI] GO:0042254        [VIEW IN EMBL-EBI] GO:0042274        [VIEW IN EMBL-EBI] GO:0043170        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043228        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0043232        [VIEW IN EMBL-EBI] GO:0043233        [VIEW IN EMBL-EBI] GO:0044085        [VIEW IN EMBL-EBI] GO:0044237        [VIEW IN EMBL-EBI] GO:0044238        [VIEW IN EMBL-EBI] GO:0044422        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044428        [VIEW IN EMBL-EBI] GO:0044446        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0046483        [VIEW IN EMBL-EBI] GO:0048229        [VIEW IN EMBL-EBI] GO:0048856        [VIEW IN EMBL-EBI] GO:0070013        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:0071840        [VIEW IN EMBL-EBI] GO:0071944        [VIEW IN EMBL-EBI] GO:0090304        [VIEW IN EMBL-EBI] GO:0097159        [VIEW IN EMBL-EBI] GO:1901360        [VIEW IN EMBL-EBI] GO:1901363        [VIEW IN EMBL-EBI] GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGGCAGCTCCTTCTAAGAATAAGAAGAAAGGGCCTGATAGGAAATCGAAAGATGCAGGTACTAAATTTAATAAAGCTTCGAAGAAACCGTTTAAAGCTAAGAAGAAAGGCTCAAACGATGCCGTTGCACCTGAAGCTATGGCCTTCCAGCTTGAAGATGATGCTCCTGAATTTCCTAGAGGTGGAGCAAGCTCACTTAGCCGTAGAGAGCGCGAGGAGATTCGTGCAGAAGTTGATGCAGAATTCGAGTCTGAGGAGAGGAGTTTGATGATGATGAAGAAGAAGAATAAAGGGAAGAAACTGCAAAACAAGAGTCATTCTGAAGCTGATGATTTGGGTTCTCTTTTTGGTGATGGGTTAACTGGCAAACTACCTCGATTTGCAAATAACATCACATTTAAGAATATCTCTCCTGGAATGAAGGTTTGGGGAGTCGTTGCTGAAGTAAATGAAAAGGACCTTGTTATTAGTCTTCCTGGGGGCTTACGCGGATTAGCACGTTCTGTTGATGCGCTTGATCCTGTTTTTGGTGATGAAATTGAGGACATTGAAGGTAACCTTCCAAGTATATTCTGCACTGGGCAGTTGGTTTCATGCACTGTGTTGCAGTTAGATGAAGATAAGAAAGATAGTGGGACAAGAAAAATTCGTCTTTCTTTGCGCCTTTCATTGTTGCACAAAGGGTTTTCGCTAGATGCCATTCAGGAAGGGATGGTCCTCACTGCATATGTGAAAAGCATAGAAGATCATGGCTACATTCTTCATTTTGGGCTGCCTTCTTTCACGGGTTTTTTGCCAAAGAACAGCCAAGATGAAAGCAGTTCTGCTGAAGTGAAAACTGGGCAACTCCTGCAAGGAATCGTTAGAAGAGTTGATAAAACTCGTAAAGTTGTTTATCTAAGTTCTGACCCCAGTGCAGTGTCTAAATGTGTGGTGAAGGATCTTAAGGGGATTTCAATTGATCTTCTTGTTCCCGGCATGATGGTCAACGCCCGTGTACAGTCTACCCTTGGAAATGGGATAATGTTATCATTCCTTACATATTTTAGTGGAACTGTTGATATTTTTCATTTACAAAATACATTTTCTGCATCAAACTGGAGAGATGATTACAACAATAATAAGAAGGTCAATGCTAGAATATTATTTGTCGATCCTTCAACTAGAGCTGTTGGCCTGACCCTTAATCAACATCTTGTTCACAATCATGCTCCTCCGACGCATGTCAAAGTTGGAGATATTTATGACGGTGCAAAAGTAGTCAGGGTAGACAAAAGCATGGGTCTTTTGCTTGAAATCCCTTCTGCTCCAGTGTCAACACCAGCTTACGTTAGCATATCTGATGCGGCTGACAAAGAGGTGCGGAATCTTGAGAAAAAGTACAAGGAGGGAAGTAAAGTTCGTGTGCGAATTCTTGGATATAGACATTTAGAAGGGCTTGCTACAGGGATTTTGAAGGCAAGTGCTTTTGAAGGCCCTGTATTTACCCACTCAGACGTCAAGCCTGGGATGGTTGTGAGGGCTAAAATCATTGCTGTTGACAGCTTTGGCGCTATAGTGCAATTTCCTGGTGGCTTGAAGGCACTCTGTCCTCTTCGCCATATGTCTGAATTTGAAATTGCGAAGCCTCGAAAAAAATTTAAGGTTGGAGCTGAACTGTTGTTCCGTGTGCTTGGTTGCAAGTCCAAGAGAATAACTGTCACACACAAGAAAACTCTTGTCAAATCAAAACTCGCAATTCTTAGCTCATATGCTGAAGCAACAGATGGGCTAATAACACATGGTTGGATAACAAAGATTGAGAAGCATGGCTGCTTTGTCCATTTTTATAATGGAGTCCAGGGATTTGCTCCCAGATCTGAGCTTGGAATAGAGCCAGGAAATGATGCAAGTTCTATGTATCATGTTGGGCAAGTTGTCAAATGTAGGGTATTAAGTTCTCTTCCTGCTTCACGCCGAATCAACCTCAGTTTCACAATGAAGCCTACAAGGGTCCCTAAAGAAGAAGCTCTGAAATTGGGTAGTGTTGTTGCTGGAGTTGTTGAGAAAGTGACCTCAAATGCTGTAATAGTGTATGTTAATTCCAAAGGTTACACGAGAGGCATAATCTCGACTGAACATTTGGCTGATCGGCATGAGCAAGCTGCTTTATTTAAGTCAGTCCTGAAGCCTGGATATGAGTTTGATCAACTTCTGGTCTTAGATATTGAGAACAACAATTTGGTTCTCTCTGCAAAATATTCTCTTGTCAACTCAGCTCATCAGCTCCCTTCAGATCTCACTGAGATACATCCTCAGTCAATAGTTCATGGGTACATTTGCAACTTAATTGACACTGGTTGCTTTGTTCGATTTCTTGGGCGTCTGACTGGTTTCTCTCCTAAAAGCAAGGCAATGGACAACCAAAAAGCTCAGCTTTCAGAAGCCTTTTACATTGGACAATCTGTTCGCAGCAATATCATCGATGTAAGCAGCGAAACAAACAGAATAACAGTGTCTTTGAAGCAATCATCCTGTTCATCTACTGATGCATCCTTCCTTCAAGAATACTTTCTTGTGGAGGAGAAGGTTGCTGAGCTACAATCTTCAGATTCTAAAGGACCTGACTTGAAGTGGGTTGAAGGATTTAACATTGGTACTGTAGTTGAGGCAAAAGTTGAAGAGTCTAAAGAAGTTGGCATTGTTGTCAGCTTTGATAAATACAATGATGTTTTGGGTTTCATTACACATTATCAACTAGGTGGAACAACAGTAGAAACAGGCTCCACTATTCGAGCTGCAGTTCTTGATGTTGCCAAGACAGAACACCTTGTTGACTTGTCTCTGAAGCCAGAGTTTCTAGATAAATGCACTGATGAGAAGTCTAATAGCCAGACTCATAAGAAGAAACGCAAAAGAGAAGTGCTTAAGAACTTGGAGGTGTATCAGTCGGTGACTGCTGTTGTCGAGATTGTGAAGGAGAACTACATGGTTCTTTCAATTCCTGAACATAATTACATTATAGGATATGCATCAGTATCAGACTACAACATACAGAAGCTTCCGCAAAAACAATTTCTTAATGGACAAAGTGTTGTTGCAACTGTTATGGCATTGCCAAGTTCTTCGACTGCAGGGAGGTTGCTTTTGCTTCTGAAATCAATAAGCGAGATAACTGAGACATCCAGCACAAAGAAGGCAAAAAAGAAGTCTAGCTATAAAATTGGGTCCCTGGTTCAGGCGGAGATTACCGAAAAGAAGCCTCTTGAAATGAGGTTAAAGTTTGGTATTGGTTTCCGTGGGAGGATTCATATAACTGAGGTAAATGATGATTGCTTTCTGGAAGATCCATTTACTAGTTTCAAAATTGGCCAGACAGTGACTGCACGAATTGTTGCTAAGACTAGCAAGGCAGATAAAAACCAGTTGTGGGAGTTGTCTATTAAACCCAAAGTCCTTACAGATTTCTGGGAGTCAGAGGATAAGCTTATGTCAAAGGAGTTTGAATTTTCATCTGGACATCGTATCACTGGATATGTTTATAAAGTGGATAGTGAATGGGCATGGTTAACAATATCTCGACATTTAAAGGCTCAGCTTTTCATTCTTGACAGTGCATGTGAACCCAGTGAACTTCAAGAATTCCAGAAACGTTTTTTTGTGGGAAAGGCTGTTAGTGGCTATGTCTTAAGTTATAACAAGGAGAAAACATTGTTGCGTTTGGTGCAACGTCCATTATGTGCTGTATCTTGCATACATGTTAATGGTGAAGCTTTGAATAAAAATGATGCCCAAAATGAGGTTCGACGTGACAATGCTGCTGCTTACATTCAGGAAGGAGATATAGTAGGTGGAAAAATTTCCAAAATACTTTCTGGTGTTGGTGGAGTACTTGTGCAAATTGGTCCACATGTGCATGGTAAAGTTCATTATACTGAACTTCAAGAGTCATGGGTGCCTAATCCTTTGGATGGATATCGTGAAGGGCAGTTTGTCAAATGCAAGGTCCTGGAGATCAGTCGTTCAGACAAGGGAACTACTCATATTGATCTGTCATTGCGTTTCTCTTTAGATGGCATGCTTAGTCAGAATTCAAGCGAACTCTCGAAGAATGCGGATCAGCGTGTGGAAAAGATTGACGATCTTCAACCTAATACTGTTGTACAGGGTTATGTGAAGAATGTGGCACCAAAAGGGTGTTTCATTTTTCTTTCAAGGAAGATTGACGCAAAAATTCTACTCTCAAACTTATCTGATGAATTTGTTGTTAGTCCTGAAGAAGAATTCCCCATTGGGAAACTTGTAACTGGAAGGGTATTATCTGTGGAGCCTTTATCCAAGCGAGTTGAAGTTACTTTAAAGAAAAATGCAAAAAGCACCGGAAAATCTGAACTTAATGATTTGAGTCGTCTAAATGTTGGAGACACAGCTTCAGGCAGGATTAAACGGGTGGAACCATATGGTCTATTTATTGCTATTGACCACACAAACTTGGTTGGACTATGCCATGTGTCAGAGCTTTCAGATGATCATGTTGACAGTGTTGAAACTAAATATAGAGCTGGGGAGAAGGTCACTGCTAGAATTTTGAAGGTAGATGTAGAAAGACGGCGAATCTCTCTGGGTATCAAAAATTTGGATAATGGAAATGACACTGACATTCTCCCTTCACAAGAAGAGTCTAGTGATGCCATTAGTGAAAATGGTACTACTGATGATGGTGATTCCAAACCACATTACAGCAGTTCACCTGCAATCGAAGGAATGGATATTGAATCTGAAAATGAAGAACATGCAGTTCTTGCACATGCGGAATCAAGAGCATCCATTCCTCCACTTAATGTCACCCTTGATGATGTGGAGCATTCTGATGTGGATGACACGATTAGCCAAACTCAAGAGCAAATTGATAAGACAAAGATCGCAGATGAAAAGGACACGAGACAGGCAAAGAAGAAAGTAAAGGAGGAGAGGGAGCAAGAAATTAGAGCTGCGGAAGAAAGGCTGCTGGAAAAGGATATTCCAAGAACTGCTGATGAATTTGAGAAACTGGTTCATGGCTCTCCTAATAATAGTTTTGTTTGGATAAAGTACATGGCTTTCATGCTTGATTTGGCTGATATTGAGAAAGCTCGCTCAATAGCTGAAAGGGCTCTGAGAACAATAAATTTTCGGGAAGAAAACGAGAAGCTAAACGTCTGGGTGGCCTACTTCAATTTGGAGAATGAATATGGCAATCCCCCAGAGGAAGCTGTTAAAAATGTATTTCAAAGAGCATTGCAGTATTGTGATCCCAAGAAGGTTCATTTAGCACTTTTAGGAGTGTATGAAAGGACTGAGCAGCATAAGTTGGCTGATGAACTTCTTGACAGAATGGTCAAGAAGTTCAAAATTTCATGCAAGATTTGGCTGAGGCGGGTACAGAGACATTTGAAGCAGGAGCAAGATGGGGTTCAGTCTACTGTTAAGCGTGCTCTGTTGAGCCTTCCCCGCCATAAACACATCAAATTCATTTCACAGGCAGCTATCCTTGAATTCAAATGTGGGGTTCCTGATAGAGGGCGGTCCATGTTTGAAGGAATTTTGCGGGAGTACCCAAAGAGAACAGACTTGTGGAGTGTTTATCTTGATCAAGAGATCAGACTTGGAGATGTGGATGTGACTCGTACGCTATTTGAGAGAGCCACTAGTCTGAGCCTCCCTGCTAAAAAGATGCAATTCTTATTCAAGAAATATCTCGAGTATGAGAAGTCTGTTGGTGACGAAGAACAAATTGAGTCGGTGAAAAAGAAGGCAATGGAATATGTTGAGAGTACAATGGCATGA

Protein:   MAAPSKNKKKGPDRKSKDAGTKFNKASKKPFKAKKKGSNDAVAPEAMAFQLEDDAPEFPRGGASSLSRREREEIRAEVDAEFESEERSLMMMKKKNKGKKLQNKSHSEADDLGSLFGDGLTGKLPRFANNITFKNISPGMKVWGVVAEVNEKDLVISLPGGLRGLARSVDALDPVFGDEIEDIEGNLPSIFCTGQLVSCTVLQLDEDKKDSGTRKIRLSLRLSLLHKGFSLDAIQEGMVLTAYVKSIEDHGYILHFGLPSFTGFLPKNSQDESSSAEVKTGQLLQGIVRRVDKTRKVVYLSSDPSAVSKCVVKDLKGISIDLLVPGMMVNARVQSTLGNGIMLSFLTYFSGTVDIFHLQNTFSASNWRDDYNNNKKVNARILFVDPSTRAVGLTLNQHLVHNHAPPTHVKVGDIYDGAKVVRVDKSMGLLLEIPSAPVSTPAYVSISDAADKEVRNLEKKYKEGSKVRVRILGYRHLEGLATGILKASAFEGPVFTHSDVKPGMVVRAKIIAVDSFGAIVQFPGGLKALCPLRHMSEFEIAKPRKKFKVGAELLFRVLGCKSKRITVTHKKTLVKSKLAILSSYAEATDGLITHGWITKIEKHGCFVHFYNGVQGFAPRSELGIEPGNDASSMYHVGQVVKCRVLSSLPASRRINLSFTMKPTRVPKEEALKLGSVVAGVVEKVTSNAVIVYVNSKGYTRGIISTEHLADRHEQAALFKSVLKPGYEFDQLLVLDIENNNLVLSAKYSLVNSAHQLPSDLTEIHPQSIVHGYICNLIDTGCFVRFLGRLTGFSPKSKAMDNQKAQLSEAFYIGQSVRSNIIDVSSETNRITVSLKQSSCSSTDASFLQEYFLVEEKVAELQSSDSKGPDLKWVEGFNIGTVVEAKVEESKEVGIVVSFDKYNDVLGFITHYQLGGTTVETGSTIRAAVLDVAKTEHLVDLSLKPEFLDKCTDEKSNSQTHKKKRKREVLKNLEVYQSVTAVVEIVKENYMVLSIPEHNYIIGYASVSDYNIQKLPQKQFLNGQSVVATVMALPSSSTAGRLLLLLKSISEITETSSTKKAKKKSSYKIGSLVQAEITEKKPLEMRLKFGIGFRGRIHITEVNDDCFLEDPFTSFKIGQTVTARIVAKTSKADKNQLWELSIKPKVLTDFWESEDKLMSKEFEFSSGHRITGYVYKVDSEWAWLTISRHLKAQLFILDSACEPSELQEFQKRFFVGKAVSGYVLSYNKEKTLLRLVQRPLCAVSCIHVNGEALNKNDAQNEVRRDNAAAYIQEGDIVGGKISKILSGVGGVLVQIGPHVHGKVHYTELQESWVPNPLDGYREGQFVKCKVLEISRSDKGTTHIDLSLRFSLDGMLSQNSSELSKNADQRVEKIDDLQPNTVVQGYVKNVAPKGCFIFLSRKIDAKILLSNLSDEFVVSPEEEFPIGKLVTGRVLSVEPLSKRVEVTLKKNAKSTGKSELNDLSRLNVGDTASGRIKRVEPYGLFIAIDHTNLVGLCHVSELSDDHVDSVETKYRAGEKVTARILKVDVERRRISLGIKNLDNGNDTDILPSQEESSDAISENGTTDDGDSKPHYSSSPAIEGMDIESENEEHAVLAHAESRASIPPLNVTLDDVEHSDVDDTISQTQEQIDKTKIADEKDTRQAKKKVKEEREQEIRAAEERLLEKDIPRTADEFEKLVHGSPNNSFVWIKYMAFMLDLADIEKARSIAERALRTINFREENEKLNVWVAYFNLENEYGNPPEEAVKNVFQRALQYCDPKKVHLALLGVYERTEQHKLADELLDRMVKKFKISCKIWLRRVQRHLKQEQDGVQSTVKRALLSLPRHKHIKFISQAAILEFKCGVPDRGRSMFEGILREYPKRTDLWSVYLDQEIRLGDVDVTRTLFERATSLSLPAKKMQFLFKKYLEYEKSVGDEEQIESVKKKAMEYVESTMA